PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK39756.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 333aa    MW: 39093.9 Da    PI: 4.4207
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK39756.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.74.1e-1591175286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W +qe  +L+e+  ++  +l+r++l+  +W ev++k+ +e  +e+s +qC+  ++nl+++y+k+k+   k +   ss++++f++l+
  KFK39756.1  91 WREQEAFVLLEVWGDRFLQLGRRSLRNEDWNEVAEKVsEELRLEKSETQCRRMIDNLKRKYRKEKTKIDK-SGLGSSKWSFFNKLD 175
                 *************************************78899***********************99998.589999*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.8E-2090176No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MGDSEDESGY PKKFYSLNRQ NHPMYSRPIP KRHAYYHEEE DEQEDDEIEE YRQVEEDEGG  60
YSRGKRQKPN NKPVSGFEFA GPSDAKVAYD WREQEAFVLL EVWGDRFLQL GRRSLRNEDW  120
NEVAEKVSEE LRLEKSETQC RRMIDNLKRK YRKEKTKIDK SGLGSSKWSF FNKLDMLLGS  180
SPKSELGLAC GVDSGEFVFM NTKVYLDKSN GFDEMMDSPG DSEEDGVDDD ENDREVDYER  240
NKLNDAASYK LLAESVERFG KVYEKMEKSK KEQMKVMEKM RADFQKDLEL QKKQIVDRAQ  300
TEIARLREEQ ENHDGESEDE EMENDSDVNL SEE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002883522.11e-177hypothetical protein ARALYDRAFT_899026
TrEMBLA0A087HCA40.0A0A087HCA4_ARAAL; Uncharacterized protein
STRINGscaffold_302996.11e-177(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM97792733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-154Trihelix family protein